Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016877.1 Corchorus olitorius cultivar O-4 contig16910, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12664

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
888--953
10
6.6
10
89
0
105
31
10
21
36
1.87
1252--1283
14
2.3
14
100
0
64
25
37
6
31
1.81
4425--4476
25
2.1
25
82
7
61
53
1
3
40
1.30
7731--7777
24
2.0
24
95
0
85
51
4
21
23
1.65
8268--8318
16
3.6
16
65
29
51
37
0
11
50
1.39
8270--8320
26
1.9
27
96
4
95
35
0
11
52
1.38
10656--10797
70
2.0
70
93
0
239
40
17
12
28
1.86
12152--12480
41
7.8
43
82
9
381
41
26
9
21
1.84
12153--12480
84
3.9
84
90
2
507
41
26
9
21
1.84
12152--12481
43
7.8
43
82
9
385
41
26
9
22
1.84

Tables:   1

The End!