Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016885.1 Corchorus olitorius cultivar O-4 contig16918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3199

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2778--2887
38
2.9
38
81
0
148
13
10
17
58
1.63
2810--2883
13
5.7
13
73
12
62
10
12
18
58
1.63
2871--2920
27
1.9
25
88
8
73
14
10
14
62
1.55
2905--2934
13
2.3
13
100
0
60
13
13
6
66
1.43
2896--2972
32
2.4
33
93
2
129
15
11
11
61
1.58

Tables:   1

The End!