Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016886.1 Corchorus olitorius cultivar O-4 contig16919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42805

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2389--2434
19
2.8
16
79
20
58
15
8
10
65
1.47
10035--10059
3
8.3
3
100
0
50
32
0
32
36
1.58
30721--30809
12
7.2
12
68
12
54
50
0
42
6
1.28
30734--30774
21
2.0
21
90
0
64
51
0
41
7
1.30
35989--36095
3
35.7
3
81
7
110
1
38
0
59
1.08
36064--36258
102
1.9
102
86
2
275
10
31
5
52
1.58
36059--36286
102
2.2
101
76
10
246
10
31
4
53
1.55
37315--37404
38
2.3
38
90
1
135
41
13
8
36
1.76
41437--41821
178
2.2
178
79
2
425
37
15
14
33
1.87

Tables:   1

The End!