Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016887.1 Corchorus olitorius cultivar O-4 contig16920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24971

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--75
23
2.6
20
75
13
51
14
8
5
71
1.27
1180--1337
80
2.0
80
92
0
262
32
12
30
24
1.92
1891--1940
20
2.4
22
80
9
61
52
8
0
40
1.31
12054--12113
29
2.0
30
83
3
77
53
0
3
43
1.17
12050--12108
24
2.5
22
80
17
66
55
0
1
42
1.09
12215--12263
26
1.9
26
88
12
75
42
0
0
57
0.99
12671--12712
22
1.9
22
85
0
57
42
21
16
19
1.89
19070--19107
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!