Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016889.1 Corchorus olitorius cultivar O-4 contig16922, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10701

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8376--8424
20
2.5
20
96
0
89
30
20
30
18
1.96
9903--9931
15
1.9
15
100
0
58
34
24
13
27
1.93
10141--10309
45
3.8
45
90
0
248
33
1
42
23
1.62
10165--10335
45
3.8
45
89
0
243
32
2
40
23
1.68

Tables:   1

The End!