Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016890.1 Corchorus olitorius cultivar O-4 contig16923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22915

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2201--2243
22
2.0
21
86
4
59
60
0
4
34
1.17
3054--3109
30
1.9
30
88
3
87
48
3
1
46
1.30
10019--10189
80
2.1
80
84
0
225
45
14
8
31
1.75
12393--12419
9
3.0
9
100
0
54
33
0
33
33
1.58
15221--15458
117
2.0
120
85
8
328
36
14
17
31
1.90
16181--16214
9
3.8
9
88
0
50
14
0
2
82
0.79
20906--21364
56
8.5
56
85
8
582
47
6
16
29
1.71
20921--21345
160
2.7
160
88
6
639
47
6
16
29
1.71
20971--21364
104
3.7
103
82
10
460
47
6
16
28
1.71
21131--21226
46
2.1
46
94
0
165
45
5
19
29
1.72
22556--22651
31
3.1
32
89
4
151
41
11
13
33
1.80

Tables:   1

The End!