Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016898.1 Corchorus olitorius cultivar O-4 contig16931, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20481

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--316
45
2.8
45
98
0
247
33
7
21
37
1.81
8083--8281
99
2.0
99
97
0
371
22
23
11
42
1.86
11129--11158
8
3.6
8
95
4
51
30
20
0
50
1.49
13421--13523
53
1.9
53
94
0
179
21
14
31
33
1.93
16171--16200
8
3.8
8
90
0
51
60
0
0
40
0.97
16951--16984
12
2.7
13
90
4
52
20
26
0
52
1.46
17100--17131
2
16.0
2
100
0
64
50
0
0
50
1.00
18686--18747
4
15.5
4
96
0
115
48
24
0
27
1.51

Tables:   1

The End!