Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016900.1 Corchorus olitorius cultivar O-4 contig16933, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11511

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3124--3158
12
2.8
13
95
4
63
25
22
14
37
1.92
5936--5973
19
2.0
19
100
0
76
10
21
26
42
1.85
7562--7754
107
1.8
107
91
0
323
40
7
8
42
1.65
10921--10987
31
2.2
29
81
5
80
49
8
17
23
1.75
11108--11186
31
2.5
31
93
0
131
35
16
11
36
1.85
11133--11247
61
1.9
60
85
1
158
32
17
13
37
1.88

Tables:   1

The End!