Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016923.1 Corchorus olitorius cultivar O-4 contig16956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23160

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4568--4676
54
2.0
54
96
0
200
25
18
23
32
1.97
4641--4959
35
9.0
35
84
4
399
25
14
19
40
1.89
6391--6485
19
4.6
19
80
16
91
30
7
2
60
1.36
6393--6590
4
50.0
4
68
11
77
26
9
1
62
1.32
6393--6486
46
2.0
46
89
4
145
29
7
2
60
1.36
6533--6613
41
2.0
41
83
9
103
22
7
0
70
1.12
22373--22434
25
2.6
24
84
5
72
59
3
6
30
1.38

Tables:   1

The End!