Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016927.1 Corchorus olitorius cultivar O-4 contig16960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24190

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--41
17
2.1
17
89
10
54
0
11
17
71
1.14
3925--3998
28
2.6
29
86
4
105
17
22
20
39
1.92
4063--4123
28
2.1
29
90
6
97
40
13
24
21
1.88
4071--4131
28
2.2
28
91
5
97
39
11
24
24
1.88
7151--7214
31
2.1
31
88
5
94
59
15
7
17
1.59
7352--7392
21
2.0
21
95
0
73
21
31
12
34
1.91
7652--7726
27
2.7
27
81
6
87
38
28
6
26
1.81
7705--7744
21
1.9
21
100
0
80
40
22
15
22
1.91
8389--8452
31
2.1
31
88
5
94
59
15
7
17
1.59
20111--20187
30
2.6
30
75
10
77
29
23
12
33
1.92
20480--20554
29
2.5
30
82
6
89
34
6
25
33
1.82
23646--23761
25
4.6
25
91
0
178
29
29
19
21
1.98
23676--23774
50
2.0
50
87
0
144
31
28
19
21
1.97

Tables:   1

The End!