Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016932.1 Corchorus olitorius cultivar O-4 contig16965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26824

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7101--7143
22
2.0
22
86
4
61
30
25
11
32
1.91
8270--8329
8
7.8
8
77
7
61
78
0
20
1
0.84
8289--8356
14
4.9
14
78
12
70
79
0
14
5
0.91
8270--8336
22
2.9
22
84
6
80
77
0
20
1
0.85
9727--9755
15
1.9
15
100
0
58
20
10
62
6
1.50
14663--14687
5
5.0
5
100
0
50
20
0
40
40
1.52
26664--26743
29
2.7
30
88
3
108
28
18
12
40
1.87

Tables:   1

The End!