Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016957.1 Corchorus olitorius cultivar O-4 contig16990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34399

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
387--419
17
1.9
17
93
0
57
15
3
6
75
1.11
1975--2032
26
2.2
26
87
6
82
34
12
3
50
1.57
12512--12807
111
2.7
107
85
7
384
40
9
8
41
1.67
13003--13047
23
2.0
22
86
4
63
17
15
31
35
1.92
15264--15346
42
2.0
42
95
0
148
48
15
7
28
1.72
15414--15530
57
2.0
60
93
5
204
39
1
26
32
1.66
17107--17317
111
1.9
113
87
6
313
45
22
11
20
1.83
17404--17473
30
2.3
31
92
4
117
40
8
8
42
1.66
17861--17895
18
1.9
18
94
0
61
48
25
8
17
1.75
18550--18623
29
2.4
31
78
10
82
21
28
14
35
1.93
28568--28944
29
13.0
29
86
0
448
18
17
23
39
1.92

Tables:   1

The End!