Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001696.1 Corchorus olitorius cultivar O-4 contig01696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9451

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
638--670
12
2.6
13
85
9
50
69
18
0
12
1.18
4079--4135
29
2.0
29
92
0
96
29
5
12
52
1.60
5863--5904
18
2.3
18
100
0
84
26
11
14
47
1.78
6790--6856
21
3.2
21
64
16
57
50
14
5
28
1.66
6777--6857
42
1.9
42
94
0
144
48
16
6
29
1.70
6923--7038
57
2.0
57
96
0
214
38
0
25
34
1.62
8432--8502
32
2.2
32
92
2
117
39
8
21
30
1.83

Tables:   1

The End!