Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016961.1 Corchorus olitorius cultivar O-4 contig16994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3987

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--425
42
2.0
42
95
0
148
44
15
8
31
1.76
491--605
56
2.0
57
93
1
196
39
1
24
34
1.66
1513--1595
42
2.0
42
95
0
148
44
15
8
31
1.76
1665--1775
56
2.0
57
94
1
197
36
2
25
35
1.70
2748--2803
18
3.2
18
78
14
64
50
0
8
41
1.34
2756--2796
7
6.3
7
88
11
61
46
0
9
43
1.36

Tables:   1

The End!