Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016964.1 Corchorus olitorius cultivar O-4 contig16997, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24131

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8838--8879
19
2.3
18
87
4
57
40
7
23
28
1.81
13004--13054
25
2.0
25
85
7
68
39
0
0
60
0.97
12974--13056
22
3.8
21
74
19
73
38
1
1
59
1.13
13247--13288
21
2.0
21
86
9
59
21
23
19
35
1.96
16320--16383
32
2.0
32
93
0
110
50
4
4
40
1.44
18901--19531
340
1.8
340
82
6
810
41
12
8
38
1.73
21312--21353
20
2.1
20
100
0
84
28
14
19
38
1.90
22269--22308
20
2.0
20
85
9
55
12
10
2
75
1.15
22434--22489
21
2.8
19
83
5
67
32
23
8
35
1.86

Tables:   1

The End!