Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016968.1 Corchorus olitorius cultivar O-4 contig17001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25152

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53--103
19
2.7
19
71
14
52
45
1
1
50
1.24
6743--6877
42
3.2
42
67
21
127
39
11
19
29
1.87
6723--6892
85
2.0
85
100
0
340
37
12
18
30
1.89
9385--9475
45
2.0
45
97
0
173
25
23
27
24
2.00
9536--9667
67
2.0
66
95
4
241
33
18
6
41
1.77
15459--15516
27
2.1
28
96
3
109
22
17
13
46
1.83
25039--25115
3
25.7
3
100
0
154
32
0
0
67
0.91

Tables:   1

The End!