Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016972.1 Corchorus olitorius cultivar O-4 contig17005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5534

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3496--3530
14
2.6
13
86
8
52
31
0
11
57
1.34
3501--3530
7
4.4
7
91
8
53
30
0
13
56
1.37
3642--3703
29
2.1
29
82
11
74
41
20
6
30
1.78
5170--5532
35
10.5
35
80
8
199
18
21
19
40
1.92
5317--5534
71
3.1
70
86
3
321
16
20
20
42
1.90
5317--5534
36
6.2
35
89
2
294
16
20
20
42
1.90
5317--5534
107
2.1
105
89
3
330
16
20
20
42
1.90

Tables:   1

The End!