Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016974.1 Corchorus olitorius cultivar O-4 contig17007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36279

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1941--2004
28
2.4
28
89
5
96
46
18
4
29
1.69
2259--2283
13
1.9
13
100
0
50
60
8
0
32
1.26
9012--9062
22
2.3
22
83
6
59
41
9
9
39
1.71
16565--16593
6
5.0
6
91
8
51
86
0
13
0
0.58
34451--34482
6
5.3
6
96
0
55
81
0
0
18
0.70
35603--35646
20
2.1
21
87
4
63
27
34
22
15
1.95

Tables:   1

The End!