Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016979.1 Corchorus olitorius cultivar O-4 contig17012, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24846

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4339--4383
22
2.0
22
91
0
72
33
26
4
35
1.77
13832--13954
23
5.5
23
85
11
175
11
18
12
57
1.64
13901--13935
18
1.9
18
100
0
70
11
20
17
51
1.75
13893--13959
18
3.5
18
70
20
55
10
19
11
58
1.62
15098--15135
19
2.0
19
94
0
67
57
18
7
15
1.62
15161--15223
17
3.8
17
89
4
94
46
36
4
12
1.63
15173--15241
34
2.2
32
82
15
81
52
33
7
7
1.57
16240--16264
2
12.5
2
100
0
50
52
48
0
0
1.00
16290--16316
2
13.5
2
100
0
54
0
0
48
51
1.00

Tables:   1

The End!