Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016981.1 Corchorus olitorius cultivar O-4 contig17014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27680

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5244--5273
9
3.3
9
95
0
51
16
26
26
30
1.97
6054--6111
19
2.9
19
87
5
80
29
22
12
36
1.90
9207--9245
18
2.2
18
95
0
69
43
15
25
15
1.86
15356--15385
15
2.1
15
93
6
53
63
6
16
13
1.50
15743--15792
21
2.4
21
89
0
73
12
24
48
16
1.79
19478--19519
15
2.7
15
96
3
75
66
14
7
11
1.43

Tables:   1

The End!