Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016983.1 Corchorus olitorius cultivar O-4 contig17016, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11582

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3437--3484
21
2.2
21
81
7
51
4
29
16
50
1.64
4875--4926
11
5.1
10
77
17
54
40
1
19
38
1.63
4886--4921
19
1.9
18
88
5
54
41
0
22
36
1.54
6057--6169
47
2.4
47
95
0
208
33
8
28
29
1.87
6747--6818
31
2.3
31
81
6
83
48
8
11
31
1.68
6760--6819
31
1.9
31
86
6
86
40
8
11
40
1.72
6761--6826
31
2.2
30
82
12
82
37
9
9
43
1.68
10136--10187
11
5.1
10
77
17
54
40
1
19
38
1.63
10147--10182
19
1.9
18
88
5
54
41
0
22
36
1.54

Tables:   1

The End!