Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016989.1 Corchorus olitorius cultivar O-4 contig17022, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13605

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
421--740
169
1.9
168
94
2
561
33
12
36
17
1.87
8713--8852
37
3.9
36
89
3
210
37
16
16
30
1.91
8714--8852
73
1.9
73
91
2
226
36
16
16
30
1.91
8822--8957
52
2.6
52
88
4
204
36
14
17
30
1.90
8901--9061
65
2.5
65
92
0
268
42
13
13
30
1.83
9077--9115
19
2.0
20
90
5
62
10
0
12
76
1.01
12209--12259
19
2.7
19
77
17
52
13
17
3
64
1.42

Tables:   1

The End!