Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016992.1 Corchorus olitorius cultivar O-4 contig17025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45129

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1684--1737
23
2.3
23
93
6
92
31
3
22
42
1.71
10156--10188
6
5.5
6
100
0
66
15
18
30
36
1.91
13020--13054
4
8.8
4
87
0
52
0
25
2
71
1.00
18192--18249
10
5.9
10
73
16
50
41
1
0
56
1.09
26059--26089
6
5.2
6
100
0
62
48
0
51
0
1.00
26466--26509
18
2.4
18
92
7
72
50
4
2
43
1.35
34029--34079
24
2.1
24
92
0
84
25
29
23
21
1.99
34322--34397
34
2.3
33
93
4
127
17
48
3
30
1.65
35239--35266
2
14.0
2
100
0
56
50
0
0
50
1.00
38019--38056
9
4.3
9
90
3
60
47
0
18
34
1.49
39345--39487
49
3.0
47
78
12
155
27
16
5
50
1.67
41905--41943
14
2.8
14
80
0
51
48
7
2
41
1.45
43447--43496
15
3.3
15
91
0
73
42
14
26
18
1.87

Tables:   1

The End!