Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016993.1 Corchorus olitorius cultivar O-4 contig17026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25215

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
447--495
16
3.1
16
90
0
80
51
12
0
36
1.40
455--501
20
2.3
20
88
0
76
51
17
0
31
1.46
499--542
2
22.0
2
100
0
88
50
50
0
0
1.00
5287--5365
40
2.0
40
97
0
149
31
12
15
40
1.84
14609--14642
10
3.3
10
88
8
50
41
20
8
29
1.82
14609--14641
11
3.1
11
91
4
50
42
21
9
27
1.83
14986--15026
2
20.5
2
89
0
64
43
0
4
51
1.23
17525--17576
23
2.4
22
90
6
79
38
3
9
48
1.54

Tables:   1

The End!