Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017003.1 Corchorus olitorius cultivar O-4 contig17036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18513

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3390--3415
9
2.9
9
100
0
52
53
23
0
23
1.46
6390--6427
19
2.0
19
85
10
51
15
5
5
73
1.19
11951--11976
13
2.0
13
100
0
52
15
0
30
53
1.42
14327--14409
31
2.7
31
96
0
157
38
14
21
25
1.91
15056--15116
21
2.9
21
80
0
77
27
14
31
26
1.95
16149--16202
19
2.6
21
77
19
60
38
3
18
38
1.69

Tables:   1

The End!