Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017008.1 Corchorus olitorius cultivar O-4 contig17041, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28895

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3902--3942
2
20.5
2
85
9
57
48
4
0
46
1.23
4543--4593
26
1.9
27
96
4
95
52
11
0
35
1.38
4545--4595
16
3.6
16
65
29
51
50
11
0
37
1.39
5071--5119
25
2.0
24
88
7
73
24
16
4
55
1.59
8775--9030
135
1.9
134
83
6
335
44
10
5
39
1.62
17429--17487
29
2.0
29
83
0
73
22
20
13
44
1.86
17497--17532
18
2.0
18
88
0
54
11
30
19
38
1.86

Tables:   1

The End!