Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017022.1 Corchorus olitorius cultivar O-4 contig17055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13396

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6893--6997
31
3.5
30
80
7
106
35
19
10
35
1.86
8351--8477
24
5.3
24
82
3
121
36
2
36
25
1.69
8365--8524
24
6.7
24
78
5
153
36
3
36
24
1.71
8716--8771
12
4.7
12
78
14
62
39
1
35
23
1.65
8716--8771
24
2.3
24
87
0
76
39
1
35
23
1.65
10187--10258
31
2.4
28
80
15
74
16
8
2
72
1.21
10887--10950
21
2.9
23
81
9
87
35
10
0
53
1.36
10967--11007
17
2.4
17
87
0
55
53
9
0
36
1.34

Tables:   1

The End!