Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017031.1 Corchorus olitorius cultivar O-4 contig17064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17709

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2918--3092
29
6.0
29
97
1
332
34
17
17
31
1.93
8515--8617
54
1.9
54
88
4
154
39
15
31
13
1.86
9523--10038
58
8.6
58
87
4
597
38
13
22
25
1.91
9880--10058
62
2.9
62
85
5
175
37
12
22
26
1.90
11741--11770
2
15.0
2
92
0
51
53
0
0
46
1.00
12892--12922
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!