Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017041.1 Corchorus olitorius cultivar O-4 contig17074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43454

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9503--9636
67
2.0
67
100
0
268
28
10
22
38
1.87
10169--10208
18
2.2
18
86
4
53
45
5
20
30
1.72
10766--10808
19
2.3
18
84
4
50
11
20
9
58
1.61
22949--22984
18
2.1
17
89
5
54
38
0
2
58
1.13
23241--23279
14
2.8
14
80
0
51
35
0
0
64
0.94
24187--24211
11
2.3
11
100
0
50
84
0
8
8
0.79
24177--24206
14
2.1
14
93
0
51
86
0
10
3
0.67
26258--26323
34
2.0
34
90
3
107
18
18
15
48
1.81
28570--28633
30
2.1
30
97
0
119
20
18
32
28
1.96
32425--32495
18
3.8
18
76
10
70
21
63
0
15
1.31

Tables:   1

The End!