Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017047.1 Corchorus olitorius cultivar O-4 contig17080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21678

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1554--1619
32
2.1
32
100
0
132
24
15
12
48
1.78
3536--3575
12
3.4
12
82
3
55
7
37
42
12
1.71
6994--7027
17
2.0
17
100
0
68
23
17
17
41
1.90
10839--10871
15
2.2
15
89
10
50
60
24
6
9
1.49
13205--13377
22
8.1
22
65
15
69
34
17
11
35
1.86
13464--13766
22
14.0
22
69
12
153
36
17
7
37
1.79
13510--13589
23
3.5
23
83
6
101
40
17
6
36
1.75
13892--13969
22
3.5
22
83
0
84
26
17
11
43
1.84
14004--14062
22
2.7
23
87
7
79
38
11
8
40
1.72
21366--21397
2
16.0
2
93
0
55
50
0
3
46
1.17

Tables:   1

The End!