Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017070.1 Corchorus olitorius cultivar O-4 contig17103, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8394

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
677--737
17
3.6
18
72
18
67
40
9
16
32
1.81
6119--6306
93
2.0
93
88
2
279
52
2
13
31
1.53
6342--6403
31
2.0
31
90
0
97
43
6
20
29
1.77
6564--6625
31
2.0
31
93
0
106
48
6
16
29
1.70
6230--6655
222
1.9
222
91
0
699
48
6
12
32
1.66
7709--7772
2
32.0
2
72
12
51
42
9
0
48
1.35
7709--7778
23
3.1
22
78
13
63
41
10
1
47
1.46
7988--8068
39
2.0
40
92
2
137
50
8
3
37
1.51
8059--8104
24
2.0
23
95
4
83
30
6
8
54
1.56

Tables:   1

The End!