Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017073.1 Corchorus olitorius cultivar O-4 contig17106, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23525

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5589--5626
15
2.4
16
91
4
60
63
13
10
13
1.53
7705--7746
15
2.7
15
92
3
66
64
14
9
11
1.50
10586--10615
15
2.1
15
93
6
53
63
6
16
13
1.50
10970--11042
21
3.4
21
78
1
74
15
20
46
17
1.84
14007--14048
15
2.7
15
92
3
66
64
14
9
11
1.50
14766--14795
12
2.4
13
94
5
53
70
6
13
10
1.34
18213--18366
33
4.9
32
77
13
158
24
22
27
25
1.99
18287--18339
26
2.0
26
92
0
88
15
22
32
30
1.94
18254--18366
59
1.9
58
92
1
190
22
23
28
25
1.99

Tables:   1

The End!