Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017076.1 Corchorus olitorius cultivar O-4 contig17109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8062

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4943--4967
8
3.1
8
100
0
50
76
0
12
12
1.04
5375--5445
13
5.2
13
70
26
58
67
12
4
15
1.37
6085--6210
50
2.5
50
84
2
155
34
18
15
32
1.92
6867--7155
50
5.8
50
92
0
416
29
27
15
28
1.96
7480--7560
27
3.0
28
82
10
98
17
13
25
43
1.86
7480--7554
29
2.7
26
85
8
96
16
13
26
44
1.84

Tables:   1

The End!