Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017080.1 Corchorus olitorius cultivar O-4 contig17113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17247

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10115--10150
19
1.9
18
88
5
54
27
22
8
41
1.82
11231--11255
5
5.0
5
100
0
50
20
0
0
80
0.72
16944--17074
24
5.5
23
79
5
91
11
4
58
25
1.51
17007--17072
12
5.5
12
74
0
60
13
3
54
28
1.54
17064--17102
18
2.2
18
85
0
51
7
10
56
25
1.59
17088--17173
36
2.4
36
86
3
102
23
10
45
20
1.82
17109--17180
36
2.0
36
97
0
135
22
8
45
23
1.79
17112--17191
36
2.2
36
90
0
124
20
7
50
22
1.73
17139--17245
54
2.0
54
96
0
196
16
7
50
25
1.71

Tables:   1

The End!