Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017082.1 Corchorus olitorius cultivar O-4 contig17115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24476

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1301--1979
266
2.5
266
94
0
1178
35
20
13
29
1.92
6318--6387
29
2.4
29
92
0
122
30
21
15
32
1.94
11683--11908
117
1.9
117
98
0
434
28
15
41
15
1.87
13105--13163
21
2.8
21
89
0
91
28
23
37
10
1.88
17469--17498
10
3.0
10
90
0
51
3
10
0
86
0.67
17986--18019
16
2.1
17
88
5
52
2
26
41
29
1.70
23794--23863
26
2.6
27
95
2
124
17
21
27
34
1.95

Tables:   1

The End!