Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017085.1 Corchorus olitorius cultivar O-4 contig17118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19625

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1914--2061
74
2.0
74
97
0
278
29
27
11
31
1.92
7885--8024
68
2.1
68
98
0
271
40
12
17
29
1.86
12292--12342
25
2.0
25
96
0
93
35
11
21
31
1.90
14639--14669
16
1.9
16
100
0
62
45
32
0
22
1.53
14956--14988
16
2.0
17
88
5
50
42
21
30
6
1.77
16583--16630
3
16.7
3
87
8
64
29
0
4
66
1.10
16583--16626
11
3.9
11
85
5
61
29
0
4
65
1.12
18445--18477
10
3.0
11
86
13
50
42
0
3
54
1.15
18473--18513
21
1.9
22
85
5
57
41
2
0
56
1.13
18445--18525
23
3.6
23
74
14
78
44
1
1
53
1.16
19268--19304
2
18.0
2
94
5
65
48
0
2
48
1.15

Tables:   1

The End!