Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017086.1 Corchorus olitorius cultivar O-4 contig17119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27730

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8489--8568
31
2.5
33
88
8
130
33
11
20
35
1.88
16424--16463
21
1.9
21
100
0
80
35
25
15
25
1.94
16767--16808
20
2.0
21
86
4
59
23
21
16
38
1.93
19422--19642
108
2.0
108
94
0
388
30
23
19
26
1.98
20748--20789
20
2.0
21
86
4
59
23
21
16
38
1.93
24076--24249
86
2.0
86
94
0
303
34
21
13
31
1.91
26766--26799
17
2.0
17
100
0
68
47
11
17
23
1.81

Tables:   1

The End!