Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017100.1 Corchorus olitorius cultivar O-4 contig17133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18239

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5828--5906
41
1.9
41
89
5
124
44
16
8
30
1.78
10333--10397
31
2.2
31
88
5
98
50
12
15
21
1.76
10518--10595
31
2.5
31
89
0
120
35
16
11
35
1.85
11653--11733
31
2.6
31
92
0
135
38
11
16
34
1.84
11852--11918
31
2.2
29
82
10
82
20
13
11
53
1.71
18155--18211
18
3.4
17
76
11
55
45
0
3
50
1.18

Tables:   1

The End!