Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017106.1 Corchorus olitorius cultivar O-4 contig17139, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30689

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2794--2818
10
2.5
10
100
0
50
8
0
0
92
0.40
21969--22008
19
2.1
19
85
4
53
55
2
0
42
1.13
21996--22036
12
3.4
12
86
0
64
51
2
0
46
1.14
22921--22996
31
2.5
30
95
4
136
43
10
7
38
1.68
23668--23923
123
2.0
124
85
6
343
37
11
1
49
1.50
23909--23947
14
2.9
13
80
3
51
41
2
2
53
1.28
29051--29085
17
2.1
17
89
5
54
54
25
11
8
1.64
29304--29393
32
2.8
32
87
0
117
37
33
11
17
1.85
30496--30533
20
1.9
20
88
0
58
21
42
7
28
1.81
30504--30543
21
1.9
20
85
10
53
15
42
12
30
1.83

Tables:   1

The End!