Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017115.1 Corchorus olitorius cultivar O-4 contig17148, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10841

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1312--1353
22
1.9
22
85
0
57
45
7
11
35
1.69
2721--2769
15
3.3
14
81
13
53
53
0
2
44
1.12
2724--2765
9
4.7
9
77
11
50
54
0
2
42
1.13
2728--2778
24
2.1
24
85
0
66
49
0
5
45
1.26
6285--6317
16
2.1
16
100
0
66
30
0
30
39
1.57
7498--7816
161
2.0
156
87
4
460
35
10
9
45
1.71
8134--8175
22
1.9
22
90
0
66
38
11
7
42
1.69
8139--8187
22
2.2
22
85
7
64
34
12
6
46
1.66

Tables:   1

The End!