Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017126.1 Corchorus olitorius cultivar O-4 contig17159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5152

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1733--1772
2
20.0
2
94
0
71
47
0
2
50
1.14
2557--2600
21
2.2
20
83
4
52
45
15
13
25
1.83
2754--2830
41
1.9
40
87
10
113
24
19
23
32
1.97
3074--3568
69
7.2
69
92
0
758
28
15
28
27
1.96
4812--4874
31
2.0
31
100
0
126
33
19
22
25
1.97

Tables:   1

The End!