Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017127.1 Corchorus olitorius cultivar O-4 contig17160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20313

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1803--1831
2
14.5
2
100
0
58
48
0
0
51
1.00
5604--5722
38
3.1
38
81
6
132
31
22
23
22
1.99
5895--6362
38
12.7
38
79
10
411
28
18
17
35
1.94
6061--6248
100
1.9
101
88
6
292
27
18
19
35
1.95
6024--6297
138
2.0
139
87
4
401
29
17
17
35
1.93
7108--7142
17
2.1
17
94
0
61
20
8
17
54
1.68
8711--8809
32
3.1
32
80
2
101
32
22
18
27
1.97
15872--15909
16
2.4
16
86
8
51
26
2
7
63
1.35
20033--20140
17
6.2
17
75
7
74
57
18
8
15
1.63
20026--20123
17
5.5
17
75
8
88
60
17
6
16
1.55
20152--20182
16
2.0
16
93
6
55
58
16
6
19
1.59

Tables:   1

The End!