Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017129.1 Corchorus olitorius cultivar O-4 contig17162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12175

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
945--986
15
2.7
15
92
3
66
64
14
9
11
1.50
4117--4187
37
1.9
37
91
0
115
36
15
8
39
1.78
4768--4830
29
2.1
30
82
2
74
77
3
14
4
1.05
7466--7655
74
2.7
71
89
6
280
26
11
20
41
1.87
11160--11478
63
5.0
64
84
6
398
37
15
25
21
1.93
11172--11478
129
2.4
126
84
4
402
36
14
25
22
1.93

Tables:   1

The End!