Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017130.1 Corchorus olitorius cultivar O-4 contig17163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9364

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--158
21
2.1
21
95
0
79
34
31
22
11
1.90
436--475
20
2.1
19
85
4
53
37
0
0
62
0.95
432--475
21
2.2
19
84
8
52
38
0
0
61
0.96
2533--2595
31
2.1
30
85
5
83
33
15
11
39
1.83
2556--2611
29
2.0
28
82
3
67
26
16
10
46
1.79
7786--7819
1
34.0
1
100
0
68
100
0
0
0
0.00
7937--7969
12
2.8
12
86
4
50
63
3
6
27
1.32
8287--8316
13
2.3
13
100
0
60
53
40
0
6
1.27

Tables:   1

The End!