Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017136.1 Corchorus olitorius cultivar O-4 contig17169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16708

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247--272
13
2.0
13
100
0
52
46
0
0
53
1.00
861--1009
74
2.0
74
98
0
289
28
22
14
34
1.93
2924--2986
31
2.1
29
85
5
81
23
22
22
31
1.98
5237--5272
18
2.0
18
94
0
63
30
13
38
16
1.88
13291--13544
107
2.4
103
89
5
375
41
7
9
41
1.65
16031--16073
2
21.5
2
90
0
68
46
2
2
48
1.27

Tables:   1

The End!