Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017137.1 Corchorus olitorius cultivar O-4 contig17170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29782

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--40
2
17.5
2
100
0
70
48
0
0
51
1.00
5791--5867
29
2.6
30
83
8
95
46
19
18
15
1.84
5791--5849
30
1.9
31
89
3
93
45
18
16
18
1.85
25653--25759
31
3.5
30
76
10
110
35
21
18
24
1.96
25829--25930
29
3.4
29
72
10
107
30
20
17
31
1.96
25797--25961
60
2.8
60
87
1
233
29
19
17
33
1.95
25798--25965
31
5.6
29
69
12
90
29
19
17
33
1.95
28109--28224
58
2.0
58
83
5
144
32
14
21
31
1.93
29489--29560
36
2.1
34
86
5
99
20
9
8
61
1.53

Tables:   1

The End!