Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017138.1 Corchorus olitorius cultivar O-4 contig17171, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21671

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
384--464
39
2.0
40
90
2
128
37
4
8
49
1.55
2889--2941
26
2.0
26
92
0
88
24
24
35
15
1.94
9747--9914
31
5.4
31
81
0
156
20
22
23
33
1.97
9759--9914
62
2.5
62
84
0
195
20
22
23
33
1.97
10210--10234
11
2.3
11
100
0
50
56
20
8
16
1.65
14798--14866
18
3.8
18
78
0
84
17
30
26
26
1.97
16636--16671
17
2.1
17
94
0
63
30
8
19
41
1.81
20849--20878
16
1.9
15
93
6
51
33
23
6
36
1.81

Tables:   1

The End!