Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017145.1 Corchorus olitorius cultivar O-4 contig17178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17563

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1028--1099
32
2.2
32
90
7
110
56
0
19
23
1.41
1531--2543
338
3.0
331
81
5
1094
36
13
14
35
1.86
2894--2923
15
1.9
16
93
6
53
53
3
0
43
1.17
3279--3341
26
2.3
28
86
5
85
44
11
11
33
1.75
4328--4359
5
6.8
5
86
13
50
21
18
0
59
1.38
4328--4367
13
2.9
13
88
7
53
22
17
0
60
1.37
11728--11767
20
2.0
21
90
5
64
30
0
15
55
1.41
12337--13345
329
3.1
325
79
8
963
33
14
15
36
1.87

Tables:   1

The End!