Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017147.1 Corchorus olitorius cultivar O-4 contig17180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20581

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2846--2881
19
1.9
18
88
5
54
27
22
8
41
1.82
3209--4821
329
4.9
329
78
7
1429
32
13
16
37
1.88
5440--5516
32
2.4
32
82
2
93
14
27
27
31
1.95
6023--6067
19
2.4
18
85
10
56
42
2
2
53
1.25
10729--10781
21
2.5
21
100
0
106
28
20
22
28
1.99
12481--12522
22
2.0
22
95
4
77
69
9
16
4
1.33
13801--14128
163
2.0
163
100
0
656
30
19
23
27
1.98
14368--14417
22
2.4
20
80
6
55
34
0
54
12
1.38
15439--15495
17
3.6
16
79
13
64
7
14
36
42
1.72
16069--16116
23
2.0
25
92
8
82
45
4
6
43
1.48
17147--17222
16
4.7
17
76
14
72
7
11
38
42
1.71

Tables:   1

The End!