Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017152.1 Corchorus olitorius cultivar O-4 contig17185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18544

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5925--6112
94
2.0
94
95
2
340
45
15
6
31
1.73
6462--6493
16
2.0
16
100
0
64
37
12
18
31
1.88
6478--6573
49
2.0
49
93
0
165
30
16
21
31
1.96
8642--8764
44
2.8
42
77
16
133
36
13
9
40
1.77
8601--8765
22
7.5
21
69
14
84
35
13
9
42
1.76
9128--9368
131
1.8
131
95
0
437
26
21
17
34
1.95
12259--12378
29
4.1
29
78
6
116
28
29
24
18
1.98
18323--18367
12
3.5
13
81
9
56
57
11
0
31
1.33

Tables:   1

The End!